Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908014.1_cds_XP_016458155.1_51810
CDS Infomation

[gene=LOC107781863] [db_xref=GeneID:107781863] [protein=serine/threonine-protein kinase Nek1-like isoform X3] [protein_id=XP_016458155.1] [location=join(38637..38638,38765..38810,38943..39023,39121..39163,39246..39295,39372..39453,39593..39642,40747..40820,42150..42201,43124..43543,45730..46392)] [gbkey=CDS]
Sequence

ATGTCAGAGGCCATAAAAAAAACAAAGGGCATCCATTTTCCTGAAGAGAAACTGTGCAAG
TGGCTTGTTCAACTCTTAATGGCTCTTGACTACTTGCACATGAATCACATCCTTCATCGT
GATGTCAAGTGTTCAAATATATTTCTAACAAGAGAGCAAGATATTCGTCTAGGCGATTTT
GGACTTGCCAAGATGTTGACTTCGGATGATCTTGCTTCCTCTATTGTTGGAACCCCCAGT
TACATGTGCCCTGAGCTTCTTGCAGACATACCTTATGGATCCAAGTCAGACATATGGTCC
CTAGGATGCTGCATATACGAAATGGCTGCGCTTAAGCCTGCATTCAAGGCATTTGATATG
CAAGCACTCATCAACAAAATAAACAAGTCTATTGTGGCACCTCTTCCCACAAAATACTCT
GGTCCATTCCGAGGTCTTGTCAAAAGCATGCTGCGGAAAAACCCAGAACTAAGGCCAAGC
GCAGCAGAACTTCTTAGAAATCCACTCCTTCAACCATATGTGATTAATACTCATCTCAAA
CTTAACGGCCCTAGGCGTAACAGTTTACCTGCTTCTTTGCCTGATAATGATGTAAAAAAA
ACCAGATTTGCAGTGTCTGAAAGCACACCTTTCCCAAAGAATAGAGAGAAGCGGATGTCA
TGTGGAAATGATAGGACTCTGAACCCTAGTGTTTCTGATCATGACTATACTTTTTCAAGT
CGGAGACATCCAAAAACTCCAAGCAGAGTATCTGAATTGTCTGTTGGAAGCCCTGAAAGA
GGATCAACTGTCACAAAAAAAGTCACTTCAAAAGCTATGCTTGTGACCAAGAATCCAAAA
GTGATCGTGCCGAAATCAGCTACCCCAAAAAGACAAGTGGAGCTAAGGAACAATGAAATG
GCTTCACGAACCTTGGTGAAGAGATCTGTTTCTACAACTCGTAGGGCATCCTTGCCTTTG
ACAAACAAGGCAGCAGTTCAAGAAATACCTCGAAGGCCGAGTCTCAGTTTCCTTGACTGT
ATCAAGTCTCCTGATGTTTCTGTCAATGCCCCTCGAATTGACAAGATGCTTGAGTTTCCA
TTAGCCTCATATGAAGATCCTTTCCATCCTACACGCCGAACATCATCAAACTCCGCGCAA
GGTTCCTCTGGCTCACCACAAGCTGAGTATTCAGTTATGAAAGACAAATGTACCATTCAG
ATTCCTGACAGTAAATTTGATAGACTGAGTTCAAATGATGCTTGGCGGGGGTTTGAAGGC
CCCATGGTGCATGCAGATAGAGAGGATATAACTGATTCTTCTGATCAAAATGCCACTGCT
GGTGCATCTAGCCGAACCTCATCTGACACAAGACGCCGCCGTTTTAACATGTCATCTTAT
AAACAACGGGCCGAAGCCCTGGAGGGACTACTTGAGTTCAGTGCTAGACTCTTGCAAGAA
GATAGATTTGATGAACTTGGTGTCTTATTGAAGCCATTTGGACCTGAAAAAGTTTCTCCT
AGGGAAACAGCTATTTGGTTGGCCAAGAGCATCAAAGAAAATGCTTCTAAACAAGAAGAT
TAG

Peptide Sequence

PEP ID

XP_016458155.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase Nek1-like isoform X3 [Nicotiana tabacum]
Sequence

MSEAIKKTKGIHFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTREQDIRLGDF
GLAKMLTSDDLASSIVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAALKPAFKAFDM
QALINKINKSIVAPLPTKYSGPFRGLVKSMLRKNPELRPSAAELLRNPLLQPYVINTHLK
LNGPRRNSLPASLPDNDVKKTRFAVSESTPFPKNREKRMSCGNDRTLNPSVSDHDYTFSS
RRHPKTPSRVSELSVGSPERGSTVTKKVTSKAMLVTKNPKVIVPKSATPKRQVELRNNEM
ASRTLVKRSVSTTRRASLPLTNKAAVQEIPRRPSLSFLDCIKSPDVSVNAPRIDKMLEFP
LASYEDPFHPTRRTSSNSAQGSSGSPQAEYSVMKDKCTIQIPDSKFDRLSSNDAWRGFEG
PMVHADREDITDSSDQNATAGASSRTSSDTRRRRFNMSSYKQRAEALEGLLEFSARLLQE
DRFDELGVLLKPFGPEKVSPRETAIWLAKSIKENASKQED

Transcript Sequence

Gene sequence data has not been registered.